Posts Tagged research

Sep 10 2013

In the U.S., Good News on Fisheries

Discovery News
Around the world, the status of fish and fisheries is grim indeed. Approximately 85 percent of global fish stocks are either over-exploited, fully-exploited, depleted or recovering from depletion. But rigorous management efforts have resulted in some American fisheries making a comeback.

The new report by the National Research Council assessed 55 fisheries and found 10 that have been rebuilt and five that showed good progress toward rebuilding; only nine continue to experience overfishing. What about the rest? Eleven have not shown strong progress in rebuilding but are expected to rebuild if fishing levels remain reduced and a whopping 20 were not actually over-fished despite having been initially classified as such.

The report comes with a neat interactive online graphic to track the fate of fish populations in different regions over the years. By selecting particular species or geographic areas, users can watch, as for example, yelloweye rockfish becomes steadily overfished, as chinook salmon numbers – especially susceptible to changing environmental conditions – swing wildly back and forth, and the likes of lingcod, George’s Bank haddock, king mackerel and Bering Sea snow crab stage their marches toward recovery.

The report is fairly technical, so for a summary – and an explanation of what it means in practical terms for U.S. fish consumers – Discovery News turned to Chris Dorsett, Director of Ecosystem Conservation Programs for the Ocean Conservancy.

“If you look at a map of the United States and where overfishing is still occurring, it’s almost exclusively an east coast problem,” he points out. “And when I say east coast, I mean Gulf of Mexico as well. Where we have not seen success in terms of species recovering based on management actions, that could be due to climatic factors, which aren’t particularly good for productivity. It could be due to management regimes that aren’t particularly effective. But what exacerbates the issue is that, when you drive a population to an extremely low abundance level, environmental variability plays an even more meaningful role in the recovery of that population, so recovery is a little less predictable.”

As the classic case in point, Dorsett points to cod fisheries off Canada, which collapsed in the 1990s and subsequently saw catches slashed essentially to zero. Despite such drastic measures, neither the fish population nor the fishery has shown signs of recovery.

As the NRC report notes, however, there remains some variation: fishing pressure is still too high for some fish stocks, and others have not rebounded as quickly as plans projected. To a large extent, argues Dorsett, that’s a function of natural variability in fish populations and their environments, as well as differences in the ways fisheries have been managed over the years.

In general, though, the news remains positive, increasingly so, and is reflected in the choices available to consumers.

Read the full article here.

Aug 27 2013

Ocean Acidification Will Make Climate Change Worse

TIME Science TIME ecocentric
Given that they cover 70% of the Earth’s surface—and provide about 90% of the planet’s habitable space by volume—the oceans tend to get short shrift when it comes to climate change. The leaked draft of the forthcoming coming new report from the Intergovernmental Panel on Climate Change highlighted the atmospheric warming we’re likely to see, the rate of ice loss in the Arctic and the unprecedented (at least within the last 22,000 years) rate of increase of concentrations of greenhouse gases like carbon dioxide and methane. But when it came to the oceans, press reports only focused on how warming would cause sea levels to rise, severely inconveniencing those of us who live on land.

Some of that ignorance is due to the out of sight, out of mind nature of the underwater world—a place human beings have only seen about 5% of. But it has more to do with the relative paucity of data on how climate change might impact the ocean. It’s not that scientists don’t think it matters—the reaction of the oceans to increased levels of CO2 will have an enormous effect on how global warming impacts the rest of us—it’s that there’s still a fair amount of uncertainty around the subject.

But here’s one thing they do know: oceans are absorbing a large portion of the CO2 emitted into the atmosphere—in fact, oceans are the largest single carbon sink in the world, dwarfing the absorbing abilities of the Amazon rainforest. But the more CO2 the oceans absorb, the more acidic they become on a relative scale, because some of the carbon reacts within the water to form carbonic acid. This is a slow-moving process—it’s not as if the oceans are suddenly going to become made of hydrochloric acid. But as two new studies published yesterday in the journal Nature Climate Change shows, acidification will make the oceans much less hospitable to many forms of marine life—and acidification may actually to serve to amplify overall warming.

The first study, by the German researchers Astrid Wittmann and Hans-O. Portner, is a meta-analysis looking at the specific effects rising acid levels are likely to have on specific categories of ocean life: corals, echinoderms, molluscs, crustaceans and fishes. Every category is projected to respond poorly to acidification, which isn’t that surprising—pH, which describes the relative acidity of a material, is about as basic a function of the underlying chemistry of life as you can get. (Lower pH indicates more acidity.) Rapid changes—and the ocean is acidifying rapidly, at least on a geological time scale—will be difficult for many species to adapt to.

Corals are likely to have the toughest time. The invertebrate species secretes calcium carbonate to make the rocky coastal reefs that form the basis of the most productive—and beautiful—ecosystems in the oceans. More acidic oceans will interfere with the ability of corals to form those reefs. Some coral have already shown the ability to adapt to lower pH levels, but combined with direct ocean warming—which can lead to coral bleaching, killing off whole reefs—many scientists believe that corals could become virtually extinct by the end of the century if we don’t reduce carbon emissions.

Read the full article here.

Bleaches corals off the coast of Indonesia. Ocean acidification could have disastrous impacts on sealife—and the climate |  Reinhard Dirscherl via Getty Images

Bleaches corals off the coast of Indonesia. Ocean acidification could have disastrous impacts on sealife—and the climate |
Reinhard Dirscherl via Getty Images

Aug 20 2013

Monterey Bay trawling deal hailed as a breakthrough: Fishermen, environmentalists long at odds

A “lava-in-water” effort to redefine trawling boundaries off the Central Coast may prove a turning point in the long-simmering relationship among commercial fishermen, environmentalists and the Monterey Bay National Marine Sanctuary.

The groups spent nearly a year negotiating a proposal that identifies areas the Pacific Fisheries Management Council should reopen and close to bottom fishing in the sanctuary. It was a task, participants said, that took its toll and tested the mettle of individual patience.

“There were times in it where everybody was pretty much fed up and ready to walk away, especially when the environmental groups got involved,” said Monterey fisherman Giuseppe Pennisi II.

“This was like mixing lava with water,” he said. “We had stuff boiling everywhere. We had to stop meetings and everybody go out and cool off.”

In the end, they came up with the hallmark of a good compromise: nobody got everything he wanted.

Sanctuary Superintendent Paul Michel described the outcome as a “precedent-setting, historic accomplishment.”

The “Essential Fish Habitat” boundaries were last set in 2006. Research since then identified new areas of coral and sponge that needed critical protection, said Michel.

At the same time, fishermen were unhappy with the hop-scotch effect of the boundaries. They were spending less time fishing than they were picking up and putting back nets to avoid protected areas.

“We just wanted to get some of our traditional places back that were just sand and mud,” said Pennisi. “Oceana just wanted real estate. They got back a lot more than what they gave up.”

Still, the third-generation fisherman credited the sanctuary’s Karen Grimmer, Monterey Harbormaster Steve Scheiblauer and Huff McGonigal of the Environmental Defense Fund for guiding the combatants to a “common goal” — more fish.

The proposal was submitted to the fisheries council July 31. That agency will submit its recommendation to the National Oceanic and Atmospheric Administration for final approval, a process that could take two years.

Geoff Shester of Oceana said the process was so encouraging that his group, historically at odds with fishermen, is hoping to reach a future consensus that would open trawling to prized parts of Monterey Bay, which sits in state waters, in exchange for additional closures in federal waters.

Read the full article here.

Two 70-foot trawling-style boats are docked in Moss Landing. (VERN FISHER/Herald file)

Aug 19 2013

California Wetfish Producers Association

CWPA Logo - June 2013California’s fishing industry was built largely on ‘wetfish’, so called because historically these fish were canned ‘wet from the sea’, with minimal preprocessing. Sardines, mackerel, anchovy and market squid (now called coastal pelagic species) have contributed the lion’s share of California’s commercial seafood harvest since the turn of the 20th century.

The enterprise of immigrant fishermen founded California’s wetfish industry, building up the ports of Monterey and San Pedro, San Diego and San Francisco. Today’s wetfish industry is a traditional industry with a contemporary outlook: streamlined and efficient, but still peopled by fourth and fifth-generation fishing families. Today the sons and daughters continue the enterprise begun by their fathers and grandfathers 100 years ago.

Transformed from its storied beginning, California’s wetfish industry remains an essential part of the state’s fishing culture, as well as a key contributor to our fishing economy, producing more than 80 percent of the volume and 40 percent of dockside value of all commercial fishery landings statewide.

Coastal pelagic species are also among the Golden State’s most important seafood exports. In a state that imports more than 86 percent of its seafood, the wetfish complex contributes close to 80 percent of all seafood exports, helping to offset the seafood trade imbalance.

This industry has invested in cooperative research since the beginning of the California Cooperative Fishery Investigations (CalCOFI) in the 1940s, when wetfish fishermen assessed their harvest to help fund the research partnership developed among the California Department of Fish and Game, Scripps Institution of Oceanography and the Southwest Fisheries Science Center (SWFSC).

Wetfish industry leadership established the nonprofit California Wetfish Producers Association (CWPA) in 2004, including fishermen and processors who produce most of the harvest statewide. CWPA’s mission promotes education, communication, and cooperative research to ensure sustainable fisheries.

Today CWPA’s research program continues the CalCOFI tradition, collaborating with the California Department of Fish and Wildlife and Southwest Fishery Science Center to expand knowledge of coastal pelagic species.

Read the full story here.

Aug 19 2013

California’s squid industry is booming

For years, the squid business in Morro Bay has been light weight, but this year, it’s heavy. Tons and tons of Market Squid are brought into the harbor every morning.

The abundance is because it’s spawning season. At this time of the year, Market Squid travel in massive schools to spawn and die.

The squid industry was volatile for a few years because the state did not want them to be over-fished, so regulations were put in place. Today, there is a limit on how many one boat can catch, and under new regulations, they cannot be fished on the weekends.

“This boat went out last night. They can get 40 tons in a couple hours,” said Giovanni DeGarimore.

The Ocean Angel threw nets just off the coast from Pismo Beach.

“They use these big nets. So they circle it and then they close it up at the bottom and scoop it all up,” he explained.

Once they’ve scooped tons and tons of squid, the boat heads back to Morro Bay to unload.

“We are unloading for Del Mar Seafoods. They are one of the larger producers of calamari in California,” said DeGarimore.

For Giovanni DeGarimore. the process is like a harvest. The tanks on the boat are connected to a suction tube that moves the squid onto a conveyer belt. The squid are then dumped into bins and iced.

Watch the story and read the article here.

California s squid industry is booming - KSBY

Aug 13 2013

Study finds eating salmon weekly can cut rheumatoid arthritis risk in half

Seafood News
Eating fish such as salmon at least once a week could halve the risk of developing rheumatoid arthritis, a new study has claimed.

The findings stem from a study of more than 32,000 Swedish women and offer another reason to follow the established dietary advice of regularly consuming fish for good health.

Researchers said the benefits of fishy diet are because it is rich in omega-3, which is said to protect both the heart and the brain.

A research team at Sweden’s Karolinska Institute analysed the dietary habits of 32,000 women, all of whom were born between 1914 and 1948 and were followed from 2003 to 2010.

Participants provided information on their diet, height, weight, parenthood status and educational achievements, as well as recording the frequency and amounts of various foods they ate, including several types of oily and lean fish.

A total of 205 women were diagnosed with rheumatoid arthritis during the follow-up period and the researchers discovered that a high dietary intake of omega-3 fatty acids – which are found in fish such as salmon and fresh tuna – was associated with a reduced risk of the autoimmune disease.

Read the full story here.

Aug 13 2013

New grant to “fill gap” in sardine stock assessment

New aerial surveys of sardines off Southern California will address fishermen’s concerns that sardine abundance estimates are effectively “missing California fish.”

Collaborative Fisheries Research West has awarded a $16,000 grant to a California sardine industry group to help pay for two spotter-pilot surveys. The first survey is being flown this summer and the second will occur in the spring of 2014.

The project’s leaders hope to use digitally enhanced photos of fish schools taken during the flights to develop a scientifically rigorous method for calculating sardine abundances. If this can be done, they will ask the Pacific Fishery Management Council, which manages the Pacific sardine fishery with NOAA Fisheries, to consider including California aerial survey data into its future stock assessments, from which harvesting limits are set.

Read the full article here.

California Department of Fish and Wildlife pilot Tom Evans (left) flies transects while spotter Devin Reed (right) identifies sardine schools, which are then photographed. Credit: K. Lynn/CDFW

California Department of Fish and Wildlife pilot Tom Evans (left) flies transects while spotter Devin Reed (right) identifies sardine schools, which are then photographed. Credit: K. Lynn/CDFW

Aug 12 2013

Environmental cost of conservation victories

PNAS Logo

In recent years, Marine Protected Areas (MPA), where fishing is severely restricted or not allowed, have become the Holy Grail of marine conservation for both nongovernmental organizations and governments. In the United States, the Papahānaumokuākea Marine National Monument in the NW Hawaiian Islands became the first large-scale reserve closed to fishing in 2006 (1). This reserve is 90% the size of California and was followed by the Pacific Remote Islands Marine National Monument, about half the size of California, in 2009 (2). In total, the United States has established MPAs 19-times the size of California or roughly the area of the Continental United States.

The United States is not alone. The South Georgia and South Sandwich Islands Marine Protected Area in British sub-Antarctic waters is roughly 2.5-times the area of California, and most recently Australia has declared its economic zone in the Coral Sea a no-take area of 3.1 million square kilometers, an area eight times the size of California. All of these areas are heralded as great conservation victories and the Convention on Biodiversity has set a target of 10% of the ocean protected by 2020.

Are these indeed victories? Not necessarily. I suggest it is likely that the world’s environment is actually worse off once such victories are evaluated globally.

Read the full article here.

Aug 2 2013

A convenient truth: 90% of the tunas are gone!

ISSF Logo

Last week, I had the privilege of presiding over the defense of the Ph.D. dissertation of Maria José Juan-Jordá in La Coruña, Spain. Maria José is a bright young researcher and has already published several chapters of her dissertation in the peer-reviewed literature.

The first chapter in her dissertation(1) is the last in a series of peer-reviewed scientific papers that demonstrate that the combined biomass of large oceanic predators (mostly tunas) has not declined by 90% as stated in another scientific paper ten years ago.

The 90% decline figure came from an analysis published in 2003 which concluded that “large predatory fish biomass today is only about 10% of pre-industrial levels” [Myers and Worm, 2003(2)].  Those analyses relied heavily upon catch rates from a single fishing gear type (longline) and aggregated catch across species to estimate trends in “community biomass”. The paper quickly became high-profile in the tuna world. Many environmental groups embraced it as proof that all tunas, not just the bluefins, were in serious trouble. On the other hand, tuna scientists who were actually conducting stock assessments, especially for tropical tunas knew immediately that the 90% number was totally wrong.

Over the next few years, a number of peer reviewed publications(3,4,5,6,7,8) showed that the conclusions in Myers and Worm (2003) were fundamentally flawed. Two of the most important reasons for this are: The aggregation of data, and the use of data from a single fishing method. The end result is that the 90% decline is an overestimate. This process of rebuttal is a natural part of the way science develops. Sometimes scientists reach conclusions that are wrong, for whatever reason, and other scientists discover flaws and point to them. A paper, once published, is not necessarily immortal.

Nevertheless, the notion of 90% global demise of tuna populations is still out there. It is repeated in many consumer guides published by various environmental groups that want to influence market preferences. It also pops up elsewhere: Earlier this year, I visited the web site of a newly-formed commission that aims to improve governance of ocean resources, and I was surprised to see the 90% number mentioned there. A colleague of mine who also noticed it said he was “disappointed that one of the most rebutted fisheries paper of all time continues to raise its head.”

Read the full story here.

Jul 29 2013

Study reveals mechanism behind squids’ and octopuses’ ability to change color

This shows the diffusion of the neurotransmitter applied to squid skin at upper right, which induces a wave of iridescence traveling to the lower left and progressing from red to blue. Each object in the image is a living cell, 10 microns long; the dark object in the center of each cell is the cell nucleus. Credit: UCSB

This shows the diffusion of the neurotransmitter applied to squid skin at upper right, which induces a wave of iridescence traveling to the lower left and progressing from red to blue. Each object in the image is a living cell, 10 microns long; the dark object in the center of each cell is the cell nucleus. Credit: UCSB

Color in living organisms can be formed two ways: pigmentation or anatomical structure. Structural colors arise from the physical interaction of light with biological nanostructures. A wide range of organisms possess this ability, but the biological mechanisms underlying the process have been poorly understood.

Two years ago, an interdisciplinary team from UC Santa Barbara discovered the mechanism by which a neurotransmitter dramatically changes color in the common market squid, Doryteuthis opalescens. That neurotransmitter, acetylcholine, sets in motion a cascade of events that culminate in the addition of phosphate groups to a family of unique proteins called reflectins. This process allows the proteins to condense, driving the animal’s color-changing process.

Now the researchers have delved deeper to uncover the mechanism responsible for the dramatic changes in color used by such creatures as squids and octopuses. The findings –– published in the Proceedings of the National Academy of Science, in a paper by molecular biology graduate student and lead author Daniel DeMartini and co-authors Daniel V. Krogstad and Daniel E. Morse –– are featured in the current issue of The Scientist.

Read the full article here.